S. Monkeypox, B. T. Epidermidis-murray-eaton, C. C. Broder, and L. F. Wang, Valley encephalitis Streptococcus pneumoniae 80 Hendra and Nipah viruses: pathogenesis and therapeutics, Curr Mol Med, issue.58, pp.805-821, 2005.

J. P. Durand, F. Simon, and H. Tolou, Virus West Nile: à nouveau en France chez l'homme et les chevaux, Rev Prat, issue.7, pp.54-703, 2004.

B. Vallat and . Les-zoonoses-Émergentes-et-ré-Émergentes, URL: http://www.oie.int/fr/Edito/fr_edito_nov04.htm 83. Desenclos, J.C. Maladies émergentes : mythes ou réalités ? Common themes in changing vector-borne disease scenarios, Trans R Soc Trop Med Hyg, vol.84, issue.2, pp.97-129, 2002.

J. Diamond, Evolution, consequences and future of plant and animal domestication, Nature, vol.133, issue.6898, pp.418-700, 2002.
DOI : 10.1038/414782a

P. Guillet, La colonisation des zones tempérées par des vecteurs d'origine tropicale : réalité ou fiction ?, 2001.

J. A. Patz, M. Hulme, C. Rosenzweig, T. D. Mitchell, R. A. Goldberg et al., Climate Change, JAMA, vol.312, issue.15, pp.420-627, 2002.
DOI : 10.1001/jama.2014.13186

R. Jouan and M. Magaud, Changement climatique et santé aux Etats-Unis : impacts, adaptations et recherche Ambassade de France à Washington -Mission pour la Science et la Technologie: Washington. URL: Télécharger le rapport gratuitement : http://www.bulletins-electroniques.com/rapports/smm09_068.htm 89. Wildlife Conservation Society. The Deadly Dozen, 2008.

J. Cohen and . Aids, Reconstructing the origins of the AIDS epidemic from archived HIV isolates, Science, issue.5851, pp.318-731, 2007.

Q. Gouvernement, Infections en émergence au Québec URL: http://publications.msss.gouv.qc.ca, pp.97-210, 1997.

B. B. Chomel, A. Belotto, and F. X. Meslin, Wildlife, Exotic Pets, and Emerging Zoonoses1, Emerging Infectious Diseases, vol.13, issue.1, pp.6-11, 2007.
DOI : 10.3201/eid1301.060480

URL : http://doi.org/10.3201/eid1301.060480

M. Martin, J. F. Legras, E. Pouchol, and J. H. Trouvin, ??valuation du??risque transfusionnel vis-??-vis de??la??variante de??la??maladie de??Creutzfeldt-Jakob en??France, Transfusion Clinique et Biologique, vol.13, issue.5, pp.13-298, 2006.
DOI : 10.1016/j.tracli.2006.11.003

C. West, Nile virus transmission through blood transfusion--South Dakota MMWR Morb Mortal Wkly Rep, 2006.

L. Barzon, E. Franchin, L. Squarzon, E. Lavezzo, S. Toppo et al., Genome sequence analysis of the first human West Nile virus isolated in Italy, Euro Surveill, issue.44, p.14, 2009.

N. Pavio, M. Eloit, D. Liberto, G. Boutrouille, A. Renou et al., L'hépatite E : une zoonose émergente ? Bulletin de l'Académie vétérinaire de France, pp.119-125, 2008.

M. Bigham, C. L. Enns, S. P. Holland, J. Buxton, D. Patrick et al., Diffuse lamellar keratitis complicating laser in situ keratomileusis, Journal of Cataract & Refractive Surgery, vol.31, issue.12, pp.31-2340, 2000.
DOI : 10.1016/j.jcrs.2005.05.033

S. G. Baum, Who cares about mumps? You should! Clin Infect Dis, pp.1450-1451, 2008.

D. Floret, . L. Des-nouveautés-et., K. Pyrc, M. F. Jebbink, W. Vermeulen-oost et al., URL: http://www.invs.sante.fr/beh16_17/beh_16_17_2009.pdf 100. OMS, World Health Statistics Identification of a new human coronavirus, Nat Med, vol.10, issue.4, pp.16-17, 2004.

Y. Iijima, S. Tanaka, and H. Ohishi, Multiple outbreaks of gastroenteritis due to a single strain of genotype II

K. Norovirus-in, risk factors for norovirus spread in health care settings. Jpn, J. Infect. Dis, vol.61, pp.419-42161, 2006.

W. H. Kwan, E. Navarro-sanchez, H. Dumortier, M. Decossas, H. Vachon et al., Dermal-Type Macrophages Expressing CD209/DC-SIGN Show Inherent Resistance to Dengue Virus Growth, PLoS Neglected Tropical Diseases, vol.2, issue.10, 2008.
DOI : 10.1371/journal.pntd.0000311.s004

URL : https://hal.archives-ouvertes.fr/hal-00335138

P. Aubry, Les épidémies de dengue aux Antilles-Guyane dans un contexte d'émergence et de réémergence des arboviroses. Bulletin de l'Académie Nationale de Médecine, pp.781-793, 2008.

A. Hofhuis, J. Reimerink, C. Reusken, E. J. Scholte, A. Boer et al., The hidden passenger of lucky bamboo: do imported Aedes albopictus mosquitoes cause dengue virus transmission in the Netherlands? Vector Borne Zoonotic Dis, pp.217-237, 2009.

J. Bertillon, E. La-grippe-À-paris-et-dans-quelques, K. Hoschler, P. Hardelid, E. Stanford et al., Annuaire statistique de la ville de Paris pour l'année 1890 1892: Paris. p. 101-32 URL: Le lien vers ce document est à la Bibliothèque interuniversitaire de médecine (BIUM, Paris) http://web2.bium.univ- paris5 Incidence of 2009 pandemic influenza A H1N1 infection in England: a cross-sectional serological study Symptomatic infections less frequent with H1N1pdm than with seasonal strains, Lancet PLoS Curr Influenza, vol.108, pp.1889-1890, 2009.

B. K. De, G. G. Brownlee, A. P. Kendal, and M. W. Shaw, Complete sequence of a cDNA clone of the hemagglutinin gene of influenza A/Chicken/Scotland/59 (H5N1) virus: comparison with contemporary North American and European strains, Nucleic Acids Research, vol.16, issue.9, pp.16-4181, 1988.
DOI : 10.1093/nar/16.9.4181

A. Armengaud, F. Legros, I. Quatresous, H. Barre, P. Valayer et al., A case of autochthonous Plasmodium vivax malaria, Corsica, Euro Surveill, issue.1111, 2006.

D. J. White, R. G. Means, G. S. Birkhead, E. M. Bosler, L. J. Grady et al., Human and Rodent Hantavirus Infection in New York State, Archives of Internal Medicine, vol.156, issue.7, pp.156-722, 1996.
DOI : 10.1001/archinte.1996.00440070040005

M. Vazeille, C. Jeannin, E. Martin, F. Schaffner, and A. B. Failloux, Chikungunya: A risk for Mediterranean countries?, Acta Tropica, vol.105, issue.2, pp.200-202, 2008.
DOI : 10.1016/j.actatropica.2007.09.009

A. J. Tatem, S. I. Hay, and D. J. Rogers, Global traffic and disease vector dispersal, Proceedings of the National Academy of Sciences, vol.103, issue.16, pp.6242-6249, 2006.
DOI : 10.1073/pnas.0508391103

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1435368

A. J. Tatem, D. J. Rogers, and S. I. Hay, Global Transport Networks and Infectious Disease Spread, Global transport networks and infectious disease spread, pp.293-343, 2006.
DOI : 10.1016/S0065-308X(05)62009-X

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3145127

J. Julvez, C. Ragavoodoo, A. R. Gopaul, and J. Mouchet, Maladies humaines transmises par les culicidés dans les Îles du sud-ouest de l'Océan Indien Bulletin de la société de pathologie exotique, pp.99-103, 1998.

G. F. Killeen, U. Fillinger, I. Kiche, L. C. Gouagna, and B. G. Knols, Eradication of Anopheles gambiae from Brazil: lessons for malaria control in Africa?, The Lancet Infectious Diseases, vol.2, issue.10, pp.618-645, 2002.
DOI : 10.1016/S1473-3099(02)00397-3

N. R. Waterfield, B. W. Wren, and R. H. Ffrench-constant, Invertebrates as a source of emerging human pathogens, Nature Reviews Microbiology, vol.70, issue.10, pp.833-874, 2004.
DOI : 10.1038/nrmicro1008

M. E. Woolhouse, D. T. Haydon, and R. Antia, Emerging pathogens: the epidemiology and evolution of species jumps, Trends in Ecology & Evolution, vol.20, issue.5, pp.238-282, 2005.
DOI : 10.1016/j.tree.2005.02.009

L. Gern, A. Estrada-pena, F. Frandsen, J. S. Gray, T. G. Jaenson et al., European Reservoir Hosts of Borrelia burgdorferi sensu lato, Zentralblatt f??r Bakteriologie, vol.287, issue.3, pp.287-196, 1998.
DOI : 10.1016/S0934-8840(98)80121-7

J. Mermin, L. Hutwagner, D. Vugia, S. Shallow, P. Daily et al., Infection: A Population???Based, Case???Control Study, Clinical Infectious Diseases, vol.38, issue.s3, pp.253-61, 2004.
DOI : 10.1086/381594

M. Artois, E. Fromont, and J. Ars, La faune sauvage, indicatrice du risque possible de maladie émergente ? Epidémiol. et santé anim, pp.21-31, 2003.

L. Jones-engel, G. A. Engel, J. Heidrich, M. Chalise, N. Poudel et al., Temple Monkeys and Health Implications of Commensalism, Kathmandu, Nepal, Emerging Infectious Diseases, vol.12, issue.6, pp.900-906, 2004.
DOI : 10.3201/eid1206.060030

S. J. Seligman, Single Nucleotide Polymorphisms in Human Genes and Increased Susceptibility to West Nile Virus Disease, The Journal of Infectious Diseases, vol.193, issue.8, pp.1187-1195, 2006.
DOI : 10.1086/501504

L. Imirizaldu, L. Miranda, I. Garcia-gurtubay, I. Gaston, J. Urriza et al., Neurocysticercosis. An emergent disease, An Sist Sanit Navar, vol.27, issue.2, pp.201-210, 2004.

T. F. Jones, L. A. Ingram, K. E. Fullerton, R. Marcus, B. J. Anderson et al., A Case-Control Study of the Epidemiology of Sporadic Salmonella Infection in Infants, PEDIATRICS, vol.118, issue.6, pp.118-2380, 2006.
DOI : 10.1542/peds.2006-1218

M. J. Sotir, G. Ewald, A. C. Kimura, J. I. Higa, A. Sheth et al., Outbreak of Salmonella Wandsworth and Typhimurium Infections in Infants and Toddlers Traced to a Commercial Vegetable-Coated Snack Food, The Pediatric Infectious Disease Journal, vol.28, issue.12, pp.28-1041, 2009.
DOI : 10.1097/INF.0b013e3181af6218

N. Schubel, J. Rupp, S. Gottschalk, P. Zabel, and K. Dalhoff, Disseminated mycobacterium bovis infection in an immunocompetent host, Eur J Med Res, vol.11, issue.4, pp.163-169, 2006.

J. Hars, M. L. Boschirol, A. Duvauchelle, and B. Garin-tastuji, La tuberculose à mycobacterium bovis chez le cerf et le sanglier en France : Émergence et risque pour l'élevage bovin, pp.159-393, 2006.

W. S. Tillett, M. J. Cambier, W. H. Harris, J. P. Sulfonamide-fast-pneumococci, and M. C. Blandin, SULFONAMIDE-FAST PNEUMOCOCCI. A CLINICAL REPORT OF TWO CASES OF PNEUMONIA TOGETHER WITH EXPERIMENTAL STUDIES ON THE EFFECTIVENESS OF PENICILLIN AND TYROTHRICIN AGAINST SULFONAMIDE-RESISTANT STRAINS, Journal of Clinical Investigation, vol.22, issue.2, pp.249-55, 1943.
DOI : 10.1172/JCI101390

W. M. Kirby, PROPERTIES OF A PENICILLIN INACTIVATOR EXTRACTED FROM PENICILLIN-RESISTANT STAPHYLOCOCCI 1, Journal of Clinical Investigation, vol.24, issue.2, pp.170-174, 1945.
DOI : 10.1172/JCI101594

E. Bergogne-berezin, Medical economics and optimal antibiotic therapy, Biomed Pharmacother, vol.36, issue.8-9, pp.393-398, 1982.

S. Pépin, P. Ricordeau, S. Malhotra-kumar, C. Lammens, S. Coenen et al., La consommation d'antibiotiques : situation en France au regard des autres pays européens URL: http://www.ameli.fr/fileadmin/user_upload/documents/pointreperen_6 Effect of azithromycin and clarithromycin therapy on pharyngeal carriage of macrolide-resistant streptococci in healthy volunteers: a randomised, double-blind, placebo-controlled study, Lancet, vol.137, issue.69560, pp.369-482, 2006.

S. Brinster, G. Lamberet, B. Staels, P. Trieu-cuot, A. Gruss et al., Type II fatty acid synthesis is not a suitable antibiotic target for Gram-positive pathogens, Nature, vol.178, issue.7234, pp.458-83, 2009.
DOI : 10.1038/nature07772

URL : https://hal.archives-ouvertes.fr/pasteur-00366166

B. Barr, M. Felkner, and P. M. Diamond, High school athletic departments as sentinel surveillance sites for community-associated methicillin-resistant staphylococcal infections, Tex Med, vol.102, issue.4, pp.56-61, 2006.

A. Collins, B. Forrest, and R. Klevens, Invasive Methicillin-Resistant Staphylococcus aureus Infections Among Dialysis Patients ---United States URL: http://www.cdc.gov/mmwr/preview/mmwrhtml/mm5609a3.htm 141. CDC, Severe methicillin-resistant Staphylococcus aureus community-acquired pneumonia associated with influenza-Louisiana and Georgia, MMWR Morb Mortal Wkly Rep. MMWR Morb Mortal Wkly Rep, vol.56, issue.914, pp.197-199, 2005.

S. Institut-de-veille-sanitaire and J. F. Betala, Surveillance des bactéries multirésistantes dans les établissements de santé en France URL: http://www.invs.sante.fr/publications, Réseau BMR-Raisin. Résultats, 2005.

C. Rabaud, Mise en place d'une mission régionale pour coordonner la prise en charge d'une épidémie de colonisation digestive à entérocoques résistants aux glycopeptides (ERG) en région Lorraine, France. BEH, pp.41-42, 2008.
DOI : 10.1016/s0399-077x(08)73008-7

L. M. Weigel, R. M. Donlan, D. H. Shin, B. Jensen, N. C. Clark et al., High-Level Vancomycin-Resistant Staphylococcus aureus Isolates Associated with a Polymicrobial Biofilm, Antimicrobial Agents and Chemotherapy, vol.51, issue.1, pp.51-231, 2007.
DOI : 10.1128/AAC.00576-06

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1797660

N. Fortineau, R. Leclerc, S. Maugat, and J. Robert, Ent??rocoques r??sistants ?? la vancomycine : donn??es des r??seaux de l???ONERBA et r??sultats de l???enqu??te nationale trans-r??seaux 2006 sur le portage digestif, Médecine et maladies infectieuses, pp.38-65, 2008.
DOI : 10.1016/S0399-077X(08)72995-0

R. J. Boyle, N. Curtis, N. Kelly, S. M. Garland, and J. R. Carapetis, Clinical implications of inducible beta-lactamase activity in Gram-negative bacteremia in children, The Pediatric Infectious Disease Journal, vol.21, issue.10, pp.21-935, 2002.
DOI : 10.1097/00006454-200210000-00010

D. Antoine, Les cas de tuberculose déclarés en France en URL: http://www.invs.sante.fr/BEH, BEH, issue.1111, 2005.

V. Makarov, G. Manina, K. Mikusova, U. Mollmann, O. Ryabova et al., Benzothiazinones Kill Mycobacterium tuberculosis by Blocking Arabinan Synthesis, Science, vol.324, issue.5928, pp.324-801, 2009.
DOI : 10.1126/science.1171583

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3128490

M. B. Conde, A. Efron, C. Loredo, D. Souza, G. R. Graca et al., Moxifloxacin versus ethambutol in the initial treatment of tuberculosis: a double-blind, randomised, controlled phase II trial, The Lancet, vol.373, issue.9670, pp.373-1183, 2009.
DOI : 10.1016/S0140-6736(09)60333-0

I. Pasteur and . Dossier, Les maladies infectieuses, 2005.

I. Pasteur, Communiqué de presse Tuberculose : le bacille se réfugie dans les cellules adipeuses, 2006.

J. G. Kublin, J. F. Cortese, E. M. Njunju, R. A. Mukadam, J. J. Wirima et al., Reemergence of chloroquine-sensitive Plasmodium falciparum malaria after cessation of chloroquine use in Malawi, J Infect Dis, issue.12, pp.187-1870, 2003.

J. M. Vinetz, Emerging Chloroquine-Resistant Plasmodium vivax (Benign Tertian) Malaria: The Need for Alternative Drug Treatment, Clinical Infectious Diseases, vol.42, issue.8, pp.42-1073, 2006.
DOI : 10.1086/501353

L. C. Mcdonald, G. E. Killgore, A. Thompson, R. C. Owens, . Jr et al., An epidemic, toxin gene-variant strain of Clostridium difficile, N Engl J Med, issue.23, pp.353-2433, 2005.

B. Coignard, F. Barbut, K. Blanckaert, J. M. Thiolet, I. Poujol et al., Emergence of Clostridium difficile toxinotype III, PCR-ribotype 027-associated disease, France, Euro Surveill, vol.11, issue.9, 2006.

. Institut-de-veille-sanitaire, Emergence d'infections digestives liées à Clostridium difficile de type 027, France, janvier à septembre Bilan au 19 URL: http://www.invs.sante.fr/presse Clostridium difficile: a reemerging pathogen, Calfee, D.P. Geriatrics, vol.157, issue.9, pp.63-73, 2006.

F. Barbut and J. C. Petit, Epidémiologie des infections nosocomiales à Clostridium difficile, Presse Med, vol.25, issue.8, pp.385-92, 1996.

I. Lowy, D. C. Molrine, B. A. Leav, B. M. Blair, R. Baxter et al., Treatment with monoclonal antibodies against Clostridium difficile toxins, N Engl J Med, issue.3, pp.362-197, 2010.

C. C. Hung, P. J. Chen, S. M. Hsieh, J. M. Wong, C. T. Fang et al., Invasive amoebiasis: an emerging parasitic disease in patients infected with HIV in an area endemic for amoebic infection, AIDS, vol.13, issue.17, pp.13-2421, 1999.
DOI : 10.1097/00002030-199912030-00014

P. Munoz, E. Bouza, M. Cuenca-estrella, J. M. Eiros, M. J. Perez et al., Saccharomyces cerevisiae Fungemia: An Emerging Infectious Disease, Clinical Infectious Diseases, vol.40, issue.11, pp.40-1625, 2005.
DOI : 10.1086/429916

URL : http://cid.oxfordjournals.org/cgi/content/short/40/11/1625

C. Graf and G. Gavazzi, Saccharomyces cerevisiae fungemia in an immunocompromised patient not treated with Saccharomyces boulardii preparation, Journal of Infection, vol.54, issue.3, pp.310-311, 2007.
DOI : 10.1016/j.jinf.2006.01.019

T. J. Walsh and A. H. Groll, Emerging fungal pathogens: evolving challenges to immunocompromised patients for the twenty-first century, Transplant Infectious Disease, vol.40, issue.4, pp.247-61, 1999.
DOI : 10.1016/S0966-842X(97)01206-7

S. Husain, B. D. Alexander, P. Munoz, R. K. Avery, S. Houston et al., Opportunistic Mycelial Fungal Infections in Organ Transplant Recipients: Emerging Importance of Non-Aspergillus Mycelial Fungi, Clinical Infectious Diseases, vol.37, issue.2, pp.221-230, 2003.
DOI : 10.1086/375822

S. G. Revankar, J. E. Patterson, D. A. Sutton, R. Pullen, and M. G. Rinaldi, Disseminated Phaeohyphomycosis: Review of an Emerging Mycosis, Clinical Infectious Diseases, vol.34, issue.4, pp.467-76, 2002.
DOI : 10.1086/338636

Y. Nagano, B. C. Millar, C. E. Goldsmith, J. S. Elborn, J. Rendall et al., Emergence of Scedosporium apiospermum in patients with cystic fibrosis Institut national de recherche agronomique. Dossier scientifique : "Maladies émergentes, Arch Dis Child, vol.167, issue.7, pp.92-607, 2005.

. Institut-de-veille-sanitaire, Notes d'information thématiques sur la situation sanitaire internationale Epidémie de fièvre jaune, 2007.

. Institut-de-recherche-pour-le-développement, Le réservoir du virus de Marburg identifié chez une espèce de chauve souris frugivore. Actualités scientifiques, 2007.

. Institut-de-veille-sanitaire, Syndrome viral dû à un nouvel arenavirus, Zambie/Afrique du Sud 14 novembre, 2008.

E. Duizer, Emerging food-borne Hepatitis E and porcine transmission. in 161st Meeting, SGM. Food, fluids, fingers, faeces and flies ? food-and water-borne pathogens. Monday 3, 2007.

N. Bach, D. Cuvillon, J. Brouard, F. Lafay, F. Freymuth et al., Acute respiratory tract infections due to a human metapneumovirus in children: descriptive study and comparison with respiratory syncytial virus infections, Arch Pediatr, issue.3, pp.11-212, 2004.

F. Freymuth, A. , V. Tripey, V. Bach, N. Nimal et al., nouveau virus : le métapneumovirus humain, La Revue du Praticien, issue.17, pp.57-1909, 2007.

F. G. Hayden, Respiratory viral threats, Current Opinion in Infectious Diseases, vol.19, issue.2, pp.169-78, 2006.
DOI : 10.1097/01.qco.0000216628.51563.b1

J. C. Arnold, K. K. Singh, E. Milder, S. A. Spector, M. H. Sawyer et al., Human Metapneumovirus Associated With Central Nervous System Infection in Children, The Pediatric Infectious Disease Journal, vol.28, issue.12, pp.28-1057, 2009.
DOI : 10.1097/INF.0b013e3181acd221

L. Bonzel, T. Tenenbaum, H. Schroten, O. Schildgen, S. Schweitzer-krantz et al., Frequent Detection of Viral Coinfection in Children Hospitalized With Acute Respiratory Tract Infection Using a Real-Time Polymerase Chain Reaction, The Pediatric Infectious Disease Journal, vol.27, issue.7, 2008.
DOI : 10.1097/INF.0b013e3181694fb9

C. L. Hutson, K. N. Lee, J. Abel, D. S. Carroll, J. M. Montgomery et al., Monkeypox zoonotic associations: insights from laboratory evaluation of animals associated with the multi-state US outbreak, Am J Trop Med Hyg, vol.76, issue.4, pp.757-68, 2007.

P. Hance, E. Garnotel, and M. Morillon, Chiroptères et zoonoses, une émergence sur les cinq continents, Med Trop, vol.66, issue.2, pp.119-124, 2006.

D. Rousset, M. Rakoto-andrianarivelo, R. Razafindratsimandresy, B. Randriamanalina, S. Guillot et al., Recombinant vaccine-derived poliovirus in Madagascar Ocular herpes simplex: changing epidemiology, emerging disease patterns, and the potential of vaccine prevention and therapy, Emerg Infect Dis Am J Ophthalmol, issue.973, pp.885-892, 2003.

. Institut-de-veille-sanitaire, Epidémie de syndrome mains-pieds-bouche à entérovirus Ev71 en Asie. 6 mai URL: http://www.invs.sante.fr/international/notes/note_ev71_asie_060508.pdf 182 Tick-and flea-borne rickettsial emerging zoonoses, Vet Res, issue.3, pp.36-469, 2005.

B. E. Anderson, J. E. Dawson, D. C. Jones, and K. H. Wilson, Ehrlichia chaffeensis, a new species associated with human ehrlichiosis, J Clin Microbiol, issue.12, pp.29-2838, 1991.

J. C. George, P. Brouqui, A. Stein, H. T. Tissot-dupont, P. Gallian et al., Comment un syndrome grippal estival peut révéler un premier cas d'ehrlichiose granulocytique humaine en France La revue du praticien Médecine générale URL: http://www.maladies-a-tiques, and vector-borne diseases in 930 homeless people from Marseilles. Medicine (Baltimore), pp.1715-1717, 1999.

S. J. Cutler, Possibilities for Relapsing Fever Reemergence, Emerging Infectious Diseases, vol.12, issue.3, pp.369-74, 2006.
DOI : 10.3201/eid1203.050899

URL : http://doi.org/10.3201/eid1203.050899

E. A. Belongia, Ticks, Vector-Borne and Zoonotic Diseases, vol.2, issue.4, pp.265-73, 2002.
DOI : 10.1089/153036602321653851

S. Alfandari and . Pathologies-Émergentes, URL: http://www.infectio-lille.com/diaporamas/SA/inf-emerg-arih- 29092005, 2005.

D. Giudice, P. Blanc-amrane, V. Bahadoran, P. Caumes, E. Marty et al., Pyemotes ventricosus dermatitis, southeastern France, Emerg Infect Dis, vol.1414, issue.1111, pp.1759-1761, 1759.

S. S. Munsiff, J. Li, S. V. Cook, A. Piatek, F. Laraque et al., Trends in drug-resistant Mycobacterium tuberculosis in New York City Childhood tuberculosis in a low-income Paris suburb: lessons from a resurgence brought under control, Clin Infect Dis Int J Tuberc Lung Dis, vol.42, issue.12 88, pp.976-81, 1991.

P. Aubry, Le choléra URL: http://medecinetropicale.free.fr/cours/cholera.htm 193, Musnier, J, issue.25, 2003.

H. Tissot-dupont, M. A. Amadei, M. Nezri, and D. Raoult, Wind in November, Q Fever in December, Emerging Infectious Diseases, vol.10, issue.7, pp.1264-903, 2004.
DOI : 10.3201/eid1007.030724

V. Mayans, M. Caballero, E. Garcia-de-olalla, P. Armengol, P. Codina et al., Outbreak of lymphogranuloma venereum among men who have sex with men in barcelona 2007/08 -an opportunity to debate sexual health at the eurogames URL: http://www.eurosurveillance.org/ViewArticle.aspx?ArticleId=18908 196 ulcerans infection: control, diagnosis, and treatment, Euro Surveill Lancet Infect Dis, vol.6, issue.5, pp.288-96, 2006.

F. Portaels, W. M. Meyers, A. Ablordey, A. G. Castro, K. Chemlal et al., First Cultivation and Characterization of Mycobacterium ulcerans from the Environment URL: http://www.pubmedcentral.nih.gov/picrender.fcgi?artid=2268003&blobtype=pdf 198, PLoS Neglected Tropical Diseases, vol.18, issue.231, pp.1-12, 2008.

L. Savioli, H. Smith, and A. Thompson, Giardia and Cryptosporidium join the ???Neglected Diseases Initiative???, Trends in Parasitology, vol.22, issue.5, pp.203-211, 2006.
DOI : 10.1016/j.pt.2006.02.015

A. Grzeszczuk and D. Prokopowicz, Cryptosporidium parvum: an emerging threat to the man, Przegl Epidemiol, vol.53, pp.3-4, 1999.

D. Christensson, Echinococcus Multilocularis and Trichinella spp. two re-emerging parasites, Acta Vet Scand, vol.100, pp.41-44, 2003.

T. Sreter, Z. Szell, Z. Egyed, and I. Varga, Echinococcus multilocularis: an emerging pathogen in Hungary and Central Eastern Europe? Emerg Infect Dis, pp.384-390, 2003.

P. Giraudoux, F. Raoul, F. Boue, B. Combes, R. Piarroux et al., Où l'échinococcose alvéolaire sévit-elle ? Bulletin de l Academie Nationale de Medecine, pp.1119-1144, 2008.

S. Houze, T. Ancelle, R. Matra, C. Boceno, Y. Carlier et al., Trichinellosis acquired in Nunavut: meat from grizzly bear suspected, Euro Surveill, issue.44, p.14, 2009.

N. V. Dhurandhar, Infectobesity: obesity of infectious origin URL: http://jn.nutrition.org/cgi/reprint, Journal of Nutrition, vol.13113110, issue.10, pp.2794-2797, 2001.

A. S. Gami, B. J. Witt, D. E. Howard, P. J. Erwin, L. A. Gami et al., Metabolic Syndrome and Risk of Incident Cardiovascular Events and Death, Journal of the American College of Cardiology, vol.49, issue.4, pp.403-417, 2007.
DOI : 10.1016/j.jacc.2006.09.032

J. Dumit, Illnesses you have to fight to get: Facts as forces in uncertain, emergent illnesses, Social Science & Medicine, vol.62, issue.3, pp.577-90, 2006.
DOI : 10.1016/j.socscimed.2005.06.018

P. Loulergue, P. Callard, P. Bonnard, and G. Pialoux, La st??atose h??patique??: une??maladie ??mergente chez??les??patients infect??s par??le??VIH, Pathologie Biologie, vol.54, issue.10, pp.54-587, 2006.
DOI : 10.1016/j.patbio.2006.07.018

H. M. Chen, S. J. Li, H. P. Chen, Q. W. Wang, L. S. Li et al., Obesity-Related Glomerulopathy in China: A Case Series of 90 Patients, American Journal of Kidney Diseases, vol.52, issue.1, 2008.
DOI : 10.1053/j.ajkd.2008.02.303

M. Diomedi, G. Leone, and A. Renna, The role of chronic infection and inflammation in the pathogenesis of cardiovascular and cerebrovascular disease, Drugs of Today, vol.41, issue.11, p.6, 2006.
DOI : 10.1358/dot.2005.41.11.917342

R. L. Atkinson, Viruses as an Etiology of Obesity, Mayo Clinic Proceedings, vol.82, issue.10, pp.1192-1200, 2007.
DOI : 10.4065/82.10.1192

J. M. Goodson, D. Groppo, S. Halem, and E. Carpino, Is Obesity an Oral Bacterial Disease?, Journal of Dental Research, vol.88, issue.6, pp.519-23519, 2009.
DOI : 10.1177/0022034509338353

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2744897

B. Thjodleifsson, I. Olafsson, D. Gislason, T. Gislason, R. Jogi et al., Infections and obesity: A multinational epidemiological study, Scandinavian Journal of Infectious Diseases, vol.113, issue.3, pp.40-381, 2008.
DOI : 10.1080/00365540701708293

V. Pasceri, G. Patti, G. Cammarota, C. Pristipino, G. Richichi et al., Virulent strains of Helicobacter pylori and vascular diseases: A meta-analysis, American Heart Journal, vol.151, issue.6, pp.151-1215, 2006.
DOI : 10.1016/j.ahj.2005.06.041

H. Sokol, B. Pigneur, L. Watterlot, O. Lakhdari, L. G. Bermudez-humaran et al., Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients, Proceedings of the National Academy of Sciences, vol.105, issue.43, 2008.
DOI : 10.1073/pnas.0804812105

URL : https://hal.archives-ouvertes.fr/hal-00652961

V. C. Lombardi, F. W. Ruscetti, J. Das-gupta, M. A. Pfost, K. S. Hagen et al., Detection of an Infectious Retrovirus, XMRV, in Blood Cells of Patients with Chronic Fatigue Syndrome, Science, vol.326, issue.5952, pp.326-585, 2009.
DOI : 10.1126/science.1179052

E. Bouza, P. Munoz, C. Rodriguez, F. Grill, M. Rodriguez-creixems et al., Endotipsitis: an emerging prosthetic-related infection in patients with portal hypertension, Diagnostic Microbiology and Infectious Disease, vol.49, issue.2, pp.49-77, 2004.
DOI : 10.1016/j.diagmicrobio.2004.03.006

C. Budin, F. , V. , L. Gall, C. Bouvier et al., Les oesophagites à éosinophiles : un piège diagnostique (à propos de 3 observations) URL: http://www.snfge.asso.fr/01-Bibliotheque/0A-Resumes- JFPD Emerging and reemerging infectious diseases: the perpetual challenge, Acad Med, vol.3987, issue.22012, pp.80-1079, 2004.

P. Roumagnac, F. X. Weill, C. Dolecek, S. Baker, S. Brisse et al., Evolutionary History of Salmonella Typhi, Science, vol.314, issue.5803, pp.314-1301, 2006.
DOI : 10.1126/science.1134933

N. Berthet, I. Leclercq, A. Dublineau, S. Shigematsu, A. M. Burguiere et al., High-density resequencing DNA microarrays in public health emergencies URL: http://www.nature.com/nbt Predictability and epidemic pathways in global outbreaks of infectious diseases: the SARS case study No effect of the 1918 influenza pandemic on the incidence of acute compulsory psychiatric admissions in Amsterdam, Nature Biotechnology BMC Med Eur J Epidemiol, vol.28, issue.213, pp.25-32, 2006.
DOI : 10.1038/nbt0110-25

M. Saadatian-elahi, F. Facy, C. Del-signore, and P. Vanhems, Perception du risque épidémique dans la population générale de la région Rhône, BEH, vol.34, issue.34, pp.302-304, 2006.

C. M. Tansey, M. Louie, M. Loeb, W. L. Gold, M. P. Muller et al., One-Year Outcomes and Health Care Utilization in Survivors of Severe Acute Respiratory Syndrome, Archives of Internal Medicine, vol.167, issue.12, pp.167-1312, 2007.
DOI : 10.1001/archinte.167.12.1312

K. Shaw, The 2003 SARS outbreak and its impact on infection control practices, Public Health, vol.120, issue.1, pp.8-14, 2006.
DOI : 10.1016/j.puhe.2005.10.002

G. Wen-kui, Z. Jia-tong, L. De-cheng, H. Yan-xia, H. Lin et al., The three networks framework to deal with public health emergencies in Guangxi, China, Can J Public Health, issue.5, pp.97-398, 2006.

C. Matthews, M. Niedrig, B. Niklasson, G. Lloyd, H. Schmitz et al., Voler en liberté sous étroite surveillance Plan pour un système de suivi mondial des oiseaux sauvages URL: http://www.who.int/foodsafety/fs_management/infosan_0705_fr.pdf 232 Création d'un réseau européen pour le diagnostic des maladies virales " importées " (ENIVD). Eurosurveillance, html 231. OMS. Réseau international des autorités de sécurité sanitaire des aliments surveillance des maladies infectieuses : principes et organisation en France en 2005, pp.35-232, 1998.

J. Woodall, Official versus unofficial outbreak reporting through the Internet, International Journal of Medical Informatics, vol.47, issue.1-2, pp.31-35, 1997.
DOI : 10.1016/S1386-5056(97)00079-8

. Journal-officiel-de-la-république-française, Arrêté du 22 janvier 2009 fixant la liste des centres nationaux de référence pour la lutte contre les maladies transmissibles et des laboratoires associés URL: http://www.legifrance.gouv.fr/affichTexte.do?cidTexte=JORFTEXT000020219178&dateTexte=&categorieLien=id 237 Institut de recherche pour le développement Rapport de mission de recherche sur le Chikungunya Législation sanitaire et maladies transmissibles : rôle du droit à une époque de menaces microbiennes, Gostin, L.O. RILS, vol.49, issue.1, pp.215-233, 1998.

. Institut-de-veille-sanitaire, Le dispositif de surveillance des maladies à déclaration obligatoire, 2006.

S. Antonioti, V. Pellissier, M. C. Siméoni, C. U. Manuel, S. Siyambalapitiya et al., D??claration obligatoire des maladies infectieuses, Sant?? Publique, vol.14, issue.2, pp.18-185, 2002.
DOI : 10.3917/spub.022.0165

J. B. Chin, L. , M. J. Mickaël, and B. , URL: http://www.wpro.who.int/rcm/fr/archives/rc55/rc_resolutions/wpr_rc55_r05.htm 244. OMS. Rapport sur la santé dans le monde 2007 -Un avenir plus sûr : la sécurité sanitaire mondiale au XXIe siècle URL: http://www.who.int/whr/2007/07_report_fr.pdf 245. OMS. The world health report 2006 -Working together for health, pdf 243. OMS. Résolution WPR/RC55.R5. Riposte aux flambées épidémiques, notamment au syndrome respiratoire aigu sévère (SRAS) et à la grippe et révision du Règlement sanitaire international, pp.192-541, 2004.

F. Kourilsky, Optimiser l'action de la France pour l'amélioration de la santé mondiale, 2007.

T. Couderc, N. Khandoudi, M. Grandadam, C. Visse, N. Gangneux et al., Prophylaxis and Therapy for Chikungunya Virus Infection, The Journal of Infectious Diseases, vol.200, issue.4, pp.516-539, 2009.
DOI : 10.1086/600381

URL : http://jid.oxfordjournals.org/cgi/content/short/200/4/516

W. Akahata, Z. Y. Yang, H. Andersen, S. Sun, H. A. Holdaway et al., A virus-like particle vaccine for epidemic Chikungunya virus protects nonhuman primates against infection, Nature Medicine, vol.128, issue.3, pp.16-334, 2010.
DOI : 10.1038/nm.2105

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2834826

M. J. Vreysen, K. M. Saleh, M. Y. Ali, A. M. Abdulla, Z. R. Zhu et al., <I>Glossina austeni</I> (Diptera: Glossinidae) Eradicated on the Island of Unguja, Zanzibar, Using the Sterile Insect Technique, 251. Commission européenne, Contrer la résistance microbienne. RTD Info. Magazine de la recherche européenne, pp.123-158, 2000.
DOI : 10.1603/0022-0493-93.1.123

E. R. Haine, Y. Moret, M. T. Siva-jothy, and J. Rolff, Antimicrobial Defense and Persistent Infection in Insects, Science, vol.322, issue.5905, pp.322-1257, 2008.
DOI : 10.1126/science.1165265

URL : https://hal.archives-ouvertes.fr/hal-00343225

D. Raoult and . Création-d-'un-pôle-maladies-infectieuses-et-tropicales-À-marseille, URL: http://ifr48.timone.univ- mrs.fr/files/Documents-Raoult/infectiopole.pdf 254. Institut Pasteur Communiqué de presse "L'Institut Pasteur renforce sa mobilisation contre les maladies émergentes, 2006.

P. Doshi, Trends in Recorded Influenza Mortality: United States, 1900???2004, American Journal of Public Health, vol.98, issue.5, pp.939-984, 1900.
DOI : 10.2105/AJPH.2007.119933

G. Barrier, Ethique et communication face aux maladies émergentes Actualité et dossier en santé publique URL: http://hcsp.ensp.fr/hcspi/docspdf/adsp/adsp-23/ad235559.pdf 257. OMS. Lignes directrices de l'OMS sur la communication lors de flambées de maladies, pp.39-43, 1998.

. Académie-des-sciences, G. Orth, and P. Sansonnetti, La maîtrise des maladies infectieuses Un défi de santé publique, une ambition scientifique Les Ulis. 487 p. URL: http://www.bibsciences.org/bibsup/acad- sc/common/articles/rapport4.pdf 259. Nicolle, C., Naissance vie et mort des maladies infectieuses United States Government Accountability Office (GAO) Emerging Infectious Diseases. Review of State and Federal Disease Surveillance Efforts, Félix Alcan. URL: c) Bibliothèque interuniversitaire de médecine, 1930.

J. Mainil, Maladies infectieuses et micro-organismes : de la préhistoire aux postulats de Koch -grande et petite histoire, pdf 262. Desenclos, J.C., Maladies infectieuses émergentes Traité de santé publique, F. Bourdillon, G. Brücker, and D. Tabuteau, pp.3-04, 2004.

R. Bacon, De l'admirable pouvoir et puissance de l'art et de nature. (1220?-1292) Imprimé en 1557 URL: http://visualiseur.bnf.fr/CadresFenetre?O=NUMM-3663&M=telecharger 264. Silvergleid, A.J., Early germinative ideas on the origins of infectious disease, Science, issue.5485, pp.289-1689, 2000.

A. Fleming, On the antibacterial action of cultures of a penicillium, with special reference to their use in the isolation of B. Influenzae. The british journal of experimental pathology, pp.226-236, 1929.

C. Birraux, Débats scientifiques et gestion de crise Compte rendu de l'audition publique du 29 janvier URL: http://www.assemblee-nationale.fr/12/rap-off/i1505.asp 268. Garrett, G. La réapparition des maladies infectieuses URL: http://usinfo.state.gov/journals/itgic/1196/ijgf/frgj5.htm 269. OMS, SRAS : Les leçons tirées d'une nouvelle maladie, Rapport sur la santé dans le monde 2003, 1996.

D. Raoult, Mimivirus et l'histoire du vivant URL: http://ifr48.timone.univ-mrs.fr/Fiches/Mimi, 2006.
DOI : 10.1016/s1294-5501(07)88771-1

L. Scola, B. Marrie, T. J. Auffray, J. P. Raoult, and D. , Mimivirus in Pneumonia Patients, Emerging Infectious Diseases, vol.11, issue.3, pp.449-52, 2005.
DOI : 10.3201/eid1103.040538

F. Barre-sinoussi, J. C. Chermann, F. Rey, M. T. Nugeyre, S. Chamaret et al., Isolation of a T-lymphotropic retrovirus from a patient at risk for acquired immune deficiency syndrome (AIDS), Science, vol.220, issue.4599, pp.220-868, 1983.
DOI : 10.1126/science.6189183

M. Girard, M. Pihet, and J. P. Bouchara, Les maladies infectieuses émergentes URL: http://ist.inserm.fr, Médecine/Sciences, vol.6210, issue.16416, pp.883-891, 2000.
DOI : 10.4267/10608/1752

R. N. Charrel and X. De-lamballerie, Le virus Alkhurma (famille flaviviridae, genre flavivirus) : Un pathogène émergent responsable de fièvres hémorragiques au Moyen Orient, Med Trop, issue.63, pp.296-299, 2003.